References

Allaire, JJ, Yihui Xie, Christophe Dervieux, Jonathan McPherson, Javier Luraschi, Kevin Ushey, Aron Atkins, et al. 2023. Rmarkdown: Dynamic Documents for r. https://github.com/rstudio/rmarkdown.

Andrews, Henry, and Louis Pearson. 2022. “Review of Empirical Data in Respect of Emergence and Return Times Reported for the UK’s Native Bat Species Version 6.” https://drive.google.com/file/d/1DeGHxyr9-p5XH6R6CRimsmquVD188WY8/view.

Arnold, Jeffrey B. 2023. Ggthemes: Extra Themes, Scales and Geoms for Ggplot2. https://github.com/jrnold/ggthemes.

Bat Conservation Trust. 2007. Bat Surveys: Good Practice Guidelines. Bat Conservation Trust, London.

Borcard, Daniel, Francois Gillet, and Pierre Legendre. 2011. Numerical Ecology with R. Use R! Springer Science + Business Media.

Bray, Andrew, Chester Ismay, Evgeni Chasnovski, Simon Couch, Ben Baumer, and Mine Cetinkaya-Rundel. 2023. Infer: Tidy Statistical Inference. https://github.com/tidymodels/infer.

Broman, Karl W. 2022. Broman: Karl Broman’s r Code. https://github.com/kbroman/broman.

Campitelli, Elio. 2023. metR: Tools for Easier Analysis of Meteorological Fields. https://eliocamp.github.io/metR/.

Cheng, Joe, Barret Schloerke, Bhaskar Karambelkar, and Yihui Xie. 2023. Leaflet: Create Interactive Web Maps with the JavaScript Leaflet Library. https://rstudio.github.io/leaflet/.

Christianson, Scott. 2014. 100 Diagrams That Changed the World. Batsford.

Clarke, K Robert. 1999. “Nonmetric Mutivariate Analysis in Community-Level Ecotoxicology.” Environmental Toxicology and Chemistry 18 (2): 118–27.

Clarke, K. R. 1993. “Non-Parametric Multivariate Analysis of Changes in Community Structure.” Australian Journal of Ecology 18: 117–43.

Coliins, J. (ed.). 2016. Bat Surveys for Professional Ecologists: Good Practice Guidelines. Third. Bat Conservation Trust. https://www.bats.org.uk/news/2016/02/bat-surveys-for-professional-ecologists-good-practice-guidelines-3rd-edition.

———. 2023. Bat Surveys for Professional Ecologists: Good Practice Guidelines. Fourth. Bat Conservation Trust. https://www.bats.org.uk/news/2023/09/bat-surveys-for--ecologists-good-practice-guidelines-4th-edition-launched.

Crameri, Fabio, Grace E Shephard, and Philip J Heron. 2020. “The Misuse of Colour in Science Communication.” Nature Communications 11 (5444). https://doi.org/10.1038/s41467-020-19160-7.

Dinno, Alexis. 2017. Dunn.test: Dunn’s Test of Multiple Comparisons Using Rank Sums. https://CRAN.R-project.org/package=dunn.test.

Donoho, David. 2017. “50 Years of Data Science.” Journal of Computational and Graphical Statistics 26 (4): 745–66. https://doi.org/10.1080/10618600.2017.1384734.

Dunnington, Dewey. 2023. Ggspatial: Spatial Data Framework for Ggplot2. https://paleolimbot.github.io/ggspatial/.

Dytham, Calvin. 2011. Choosing and Using Statistics: A Biologist’s Guide. Third. Wiley-Blackwell.

Emden, Helmut van. 2008. Statistics for Terrified Biologists. Blackwell Publishing.

Fowler, Jim, Lou Cohen, and Phil Jarvis. 1998. Practical Statistics for Field Biology. Second. Wiley.

Fox, Gordon A, Simoneta Negrete-Yankelevich, and And. 2015. Ecological Statistics. Oxford University Press. ww.oup.com.

Giraud, Timothée. 2022. Tanaka: Design Shaded Contour Lines (or Tanaka) Maps. https://github.com/riatelab/tanaka/.

Gohel, David. 2023. Officer: Manipulation of Microsoft Word and PowerPoint Documents. https://ardata-fr.github.io/officeverse/.

Gohel, David, and Noam Ross. 2023. Officedown: Enhanced r Markdown Format for Word and PowerPoint. https://CRAN.R-project.org/package=officedown.

Gohel, David, and Panagiotis Skintzos. 2023. Flextable: Functions for Tabular Reporting. https://ardata-fr.github.io/flextable-book/.

Hester, Jim, and Jennifer Bryan. 2022. Glue: Interpreted String Literals. https://github.com/tidyverse/glue.

Hijmans, Robert J. 2023a. Raster: Geographic Data Analysis and Modeling. https://rspatial.org/raster.

———. 2023b. Terra: Spatial Data Analysis. https://rspatial.org/.

Hollister, Jeffrey. 2023. Elevatr: Access Elevation Data from Various APIs. https://github.com/jhollist/elevatr/.

Hundt, L. 2012. Bat Surveys: Good Practice Guidelines. Second. Bat Conservation Trust.

Iannone, Richard, Joe Cheng, Barret Schloerke, Ellis Hughes, Alexandra Lauer, and JooYoung Seo. 2023. Gt: Easily Create Presentation-Ready Display Tables. https://gt.rstudio.com.

Knuth, Donald E. 1984. “Literate Programming.” Comput. J. 27 (2): 97–111. https://doi.org/10.1093/comjnl/27.2.97.

Legendre, Pierre, and Louis Legendre. 2012. Numerical Ecology. Third English. Developments in Environmental Modelling. Elsevier.

Lin, Greg. 2023. Reactable: Interactive Data Tables for r. https://glin.github.io/reactable/.

Magurran, A. E. 2004. Measuring Biological Diversity. Wiley-Blackwell.

Massicotte, Philippe, and Andy South. 2023. Rnaturalearth: World Map Data from Natural Earth. https://docs.ropensci.org/rnaturalearth/.

McCandless, David. 2012. Information Is Beautiful. William Collins.

Mock, Thomas. 2023. gtExtras: Extending Gt for Beautiful HTML Tables. https://github.com/jthomasmock/gtExtras.

Müller, Kirill. 2023. Hms: Pretty Time of Day. https://hms.tidyverse.org/.

Müller, Kirill, and Hadley Wickham. 2023. Tibble: Simple Data Frames. https://tibble.tidyverse.org/.

Natural England. 2020. Natural England’s Science, Evidence and Evaluation Strategy (2020-2025). Vol. NE764. Natural England. http://publications.naturalengland.org.uk/publication/5027096999231488.

Oksanen, Jari, Gavin L. Simpson, F. Guillaume Blanchet, Roeland Kindt, Pierre Legendre, Peter R. Minchin, R. B. O’Hara, et al. 2022. Vegan: Community Ecology Package. https://github.com/vegandevs/vegan.

Padgham, Mark, Bob Rudis, Robin Lovelace, Maëlle Salmon, and Joan Maspons. 2023. Osmdata: Import OpenStreetMap Data as Simple Features or Spatial Objects. https://docs.ropensci.org/osmdata/.

Parker, Matt. 2019. Humble Pi a Comedy of Maths Errors. Penguin.

Pebesma, Edzer. 2018. “Simple Features for R: Standardized Support for Spatial Vector Data.” The R Journal 10 (1): 439–46. https://doi.org/10.32614/RJ-2018-009.

———. 2023. Sf: Simple Features for r. https://r-spatial.github.io/sf/.

Posit team. 2022. RStudio: Integrated Development Environment for r. Boston, MA: Posit Software, PBC. http://www.posit.co/.

Pruim, Randall, Daniel T. Kaplan, and Nicholas J. Horton. 2023. Mosaic: Project MOSAIC Statistics and Mathematics Teaching Utilities. https://github.com/ProjectMOSAIC/mosaic.

R Core Team. 2023. R: A Language and Environment for Statistical Computing. Vienna, Austria: R Foundation for Statistical Computing. https://www.R-project.org/.

Robinson, David, Alex Hayes, and Simon Couch. 2023. Broom: Convert Statistical Objects into Tidy Tibbles. https://broom.tidymodels.org/.

Shannon, C. E. 1948. “A Mathematical Theory of Communication.” Bell System Technical Journal 27 (3): 379–423.

Sievert, Carson, Chris Parmer, Toby Hocking, Scott Chamberlain, Karthik Ram, Marianne Corvellec, and Pedro Despouy. 2023. Plotly: Create Interactive Web Graphics via Plotly.js. https://plotly-r.com.

Simpson, E. H. 1949. “Measurement of Diversity.” Nature 163 (4148): 688.

Slowikowski, Kamil. 2023. Ggrepel: Automatically Position Non-Overlapping Text Labels with Ggplot2. https://github.com/slowkow/ggrepel.

Smith, Alan. 2022. How Charts Work: Understand and Explain Data with Confidence. FT Publishing.

Sowler, S, and N Middleton. 2013. “Bat Passes - Redundant or Still Useful? An Alternative Approach to Teh Analysis and Interpretation of Large Amounts of Data.” In Practice 79: 16–18.

Spinu, Vitalie, Garrett Grolemund, and Hadley Wickham. 2023. Lubridate: Make Dealing with Dates a Little Easier. https://lubridate.tidyverse.org.

Thieurmel, Benoit, and Achraf Elmarhraoui. 2022. Suncalc: Compute Sun Position, Sunlight Phases, Moon Position and Lunar Phase. https://github.com/datastorm-open/suncalc.

Tierney, Nicholas, and Dianne Cook. 2023. “Expanding Tidy Data Principles to Facilitate Missing Data Exploration, Visualization and Assessment of Imputations.” Journal of Statistical Software 105 (1): 1–31. https://doi.org/10.18637/jss.v105.i07.

Tufte, Edward R. 1983. The Visual Display of Quantitative Information. Graphics Press.

———. 2020. Seeing with Fresh Eyes: Meaning, Space, Data, Truth. Graphics Press.

van der Loo, Mark, and Edwin de Jonge. 2023. Validate: Data Validation Infrastructure. https://github.com/data-cleaning/validate.

Vitolo, Claudia. 2022. Rnrfa: UK National River Flow Archive Data from r. https://ilapros.github.io/rnrfa/.

Vitolo, Claudia, Fry, Matthew, Buytaert, and Wouter. 2016. “Rnrfa: An r Package to Retrieve, Filter and Visualize Data from the UK National River Flow Archive.” The R Journal 8 (2): 102–16. https://journal.r-project.org/archive/2016/RJ-2016-036/index.html.

Wickham, Hadley. 2014. “Tidy Data.” The Journal of Statistical Software 59. http://www.jstatsoft.org/v59/i10/.

———. 2023a. Stringr: Simple, Consistent Wrappers for Common String Operations. https://stringr.tidyverse.org.

———. 2023b. Tidyverse: Easily Install and Load the Tidyverse. https://tidyverse.tidyverse.org.

Wickham, Hadley, Mara Averick, Jennifer Bryan, Winston Chang, Lucy D’Agostino McGowan, Romain François, Garrett Grolemund, et al. 2019. “Welcome to the tidyverse.” Journal of Open Source Software 4 (43): 1686. https://doi.org/10.21105/joss.01686.

Wickham, Hadley, and Jennifer Bryan. 2023. Readxl: Read Excel Files. https://readxl.tidyverse.org.

Wickham, Hadley, Winston Chang, Lionel Henry, Thomas Lin Pedersen, Kohske Takahashi, Claus Wilke, Kara Woo, Hiroaki Yutani, and Dewey Dunnington. 2023. Ggplot2: Create Elegant Data Visualisations Using the Grammar of Graphics. https://ggplot2.tidyverse.org.

Wickham, Hadley, Romain François, Lionel Henry, Kirill Müller, and Davis Vaughan. 2023. Dplyr: A Grammar of Data Manipulation. https://dplyr.tidyverse.org.

Wickham, Hadley, Jim Hester, and Jennifer Bryan. 2023. Readr: Read Rectangular Text Data. https://readr.tidyverse.org.

Wickham, Hadley, Thomas Lin Pedersen, and Dana Seidel. 2023. Scales: Scale Functions for Visualization. https://scales.r-lib.org.

Wickham, Hadley, Davis Vaughan, and Maximilian Girlich. 2023. Tidyr: Tidy Messy Data. https://tidyr.tidyverse.org.

Xie, Yihui. 2014. “Knitr: A Comprehensive Tool for Reproducible Research in R.” In Implementing Reproducible Computational Research, edited by Victoria Stodden, Friedrich Leisch, and Roger D. Peng. Chapman; Hall/CRC.

———. 2015. Dynamic Documents with R and Knitr. 2nd ed. Boca Raton, Florida: Chapman; Hall/CRC. https://yihui.org/knitr/.

———. 2023. Knitr: A General-Purpose Package for Dynamic Report Generation in r. https://yihui.org/knitr/.

Xie, Yihui, J. J. Allaire, and Garrett Grolemund. 2018. R Markdown: The Definitive Guide. Boca Raton, Florida: Chapman; Hall/CRC. https://bookdown.org/yihui/rmarkdown.

Xie, Yihui, Joe Cheng, and Xianying Tan. 2023. DT: A Wrapper of the JavaScript Library DataTables. https://github.com/rstudio/DT.

Xie, Yihui, Christophe Dervieux, and Emily Riederer. 2020. R Markdown Cookbook. Boca Raton, Florida: Chapman; Hall/CRC. https://bookdown.org/yihui/rmarkdown-cookbook.

Yau, Nathan. 2011. Visualize This: The Flowing Data Guide to Design, Visualization, and Statistics. John Wiley & Sons.

———. 2013. Data Points: Visualization That Means Something. Wiley.

Zuur, Alain F., Elena N. Ieno, and Chris S. Elphick. 2010. “A Protocol for Data Exploration to Avoid Common Statistical Problems.” Methods in Ecology and Evolution 1 (1): 3–14. https://doi.org/https://doi.org/10.1111/j.2041-210X.2009.00001.x.

Zuur, Alain F., Elena N. Ieno, and Graham M. Smith. 2007. Analysiing Ecological Data. Springer Science + Business Media.